Publikationen Prof. Dr. Volker A. Erdmann

Publikationen 2001-2005

366. Erdmann, V.A.; Barciszewska, M. Z.; Szymanski, M.; Hochberg, A.; de Groot, N.; Barciszewski, J.
The non-coding RNAs as riboregulators
Nucleic Acids Res. 29, 189-193 (2001)

367. Perbandt, M.; Vallazza, M.; Lippmann, C.; Betzel, C.; Erdmann, V.A.
Structure of an RNA duplex with an unusual GC pair in wobble-like conformation at 1.6Å resolution
Acta Cryst. D57, 219-224 (2001)

368. Barciszewska, M.Z.; Szymanski, M.; Erdmann, V.; Barciszewski, J.

Structure and functions of 5S rRNA

Acta Biochimica Polonica 48, No. 1, 191-198 (2001)

369. Wyszko, E.; Barciszewska, M. Z.; Bald, R.; Erdmann, V.A.; Barciszewski, J.

The specific hydrolysis of HIV-1 TAR RNA element with the anti-TAR hammerhead ribozyme: structural and functional implications

Int. J. of Biol. Macromol., No. 28, 373-380 (2001)

370. Lamla, T.; Mammeri, K.; Erdmann, V.A.:
The cell-free protein biosynthesis – applications and analysis of the system
Acta Biochimica Polonica 48, No. 2, 453-465 (2001)

371. Erdmann, V.A.; Barciszewska, M. Z.; Hochberg, A.; de Groot, N.; Barciszewski, J.:
Regulatory RNAs
Cell. Mol. Life Sci 58, 960-977 (2001)

372. Lamla, T.; Erdmann, V.A.:

In vitro selection of other proteins than antibodies by means of ribosome display

FEBS Lett. 502, 35-40 (2001)

373. Vallazza, M.; Senge, A.; Lippmann, C.; Perbandt, M.; Betzel, C.; Bald, R.; Erdmann, V.A.:

Crystallization and X-ray diffraction data of Thermus flavus 5S rRNA helices

J. of Cryst. Growth 232, 340-352 (2001)

374. Banumathi, S.; Vallazza, M.; Perbandt, M.; Erdmann, V.A.; Betzel, Ch.

Crystal structure of the modified domain B from Thermus flavus 5S rRNA

Jahresbericht HASYLAB/DESY 77-78 (2001)

375. Vallazza, M.; Airo, A.; Perbandt, M.; Betzel, Ch.; Erdmann, V.A.:

Diffraction studies of RNA crystals

Jahresbericht HASYLAB/DESY 531-532 (2001)

376. Barciszewska, M.Z.; Rapp, G.; Betzel, C.; Erdmann, V.A.; Barciszewski, J.:

Structural changes of tRNA and 5S rRNA induced with magnesium and visualized with synchrotron mediated hydroxyl radical

cleavage

Mol Biol Rep 28, 103-110 (2001)

377. Szymanski, M.; Barciszewska, M. Z.; Erdmann, V.A.; Barciszewski, J.:

5S Ribosomal RNA Database

Nucleic Acids Res. 30, 176-178 (2002)

378. Ylera-Dahmen, F.; Lurz, R.; Erdmann, V.A.; Fürste, J.P.:

Selection of RNA Aptamers to the Alzheimer’s Disease Amyloid Peptide

Biochem Biophys Res Commun 290, 1583-1588 (2002)

379. Kurreck, J.; Bieber, B.; Jahnel, R.; Erdmann, V.A.:

Comparative Study of DNA Enzymes and Ribozymes against the Same Full-Length Messenger RNA of the Vanilloid Receptor

Subtype I*

J. Biol. Chem. 277, No. 9, 7099-7107 (2002)

380. Kurreck, J.; Wyszko, E.; Gillen, C.; Erdmann, V.A.:

Design of antisense oligonucleotides stabilized by locked nucleic acids

Nucleic Acids Res., Vol. 30, No. 9, 1911-1918 (2002)

381. Szkaradkiewicz, K.; Nanninga, M.; Nesper-Brock, M.; Gerrits, M.; Erdmann, V.A.; Sprinzl, M.:

RNA aptamers directed against release factor 1 from Thermus thermophilus

FEBS Lett. 514, 90-95 (2002)

382. Lamla, T.; Stiege, W.; Erdmann, V.A.:

An Improved Protein Bioreactor

Mol. Cell. Proteomics 1.6, 466-471 (2002)

383. Vallazza, M.; Banumathi, S.; Perbandt, M.; Moore, K.; DeLucas, L.; Betzel, C.; Erdmann, V.A.:

Crystallization and structure analysis of Thermus flavus 5S rRNA helix B

Acta Cryst.D58, 1700-1703 (2002)

384. Zaborowska, Z.; Fürste, J.P.; Erdmann, V.A.; Kurreck, J.:

Sequence Requirements in the Catalytic Core of the „10-23“ DNA Enzyme

J. Biol. Chem. 277, No. 43, 40617-40622 (2002)

385. Szymanski, M.; Erdmann, V.A.; Barciszewski, J.:

Noncoding regulatory RNAs database

Nucleic Acids Res., Vol. 31, No. 1, 429-431 (2003)

386. Kurreck, J.; Fürste, J.P.; Erdmann, V.A.:

Ribozyme in der molekularen Medizin

Ganten/Ruckpaul (Hrsg.), Grundlagen der Molekularen Medizin, 2. Auflage, Springer Verlag, Heidelberg, 612-630 (2003)

387. Perbandt, M.; Barciszewska, M.Z.; Betzel, C.; Erdmann, V.A.; Barciszewski, J.:

A critical role of water in the specific cleavage of the anticodon loop of some eukaryotic methionine initiator tRNAs

Mol. Biol. Rep. 30, 27-31 (2003)

388. Barciszewska, M.; Wyszko, E.; Bald, R.; Erdmann, V.A.; Barciszewski, J.:

5S rRNA Is a Leadzyme. A Molecular Basis for Lead Toxicity

J. Biochem. 133, 309-315 (2003)

389. Grünweller, A.; Wyszko, E.; Bieber, B.; Jahnel, R.; Erdmann, V.A.; Kurreck, J.:

Comparison of different antisense strategies in mammalian cells using locked nucleic acids, 2`-O-methyl RNA, phosphorothioates

and small interfering RNA

Nucleic Acids Res., Vol. 31, No. 12, 3185-3193 (2003)

390. Lamla, T.; Erdmann, V.A.:

Searching Sequence Space for High-affinity Binding Peptides using Ribosome Display

J. Mol. Biol. 329, 381-388 (2003)

391. Szymanski, M.; Barciszewska, M.Z.; Erdmann, V.A.; Barciszewski, J.:
5 S rRNA: structure and interactions
Biochem. J. 371, 641-651 (2003)

392. Barciszewski, J.; Erdmann, V.A., editors:
Noncoding RNAs: Molecular Biology and Molecular Medicine
Landes Bioscience, Kluwer Academic/Plenum Publishers, New York , N.Y. (2003)

393. Willkomm, D.K.; Gruegelsiepe, H.; Gudinakis, O.; Kretschmer-Kazemi Far, R.; Bald, R.; Erdmann, V.A.; Hartmann, R.K.:
Evaluation of Bacterial RNase P RNA as a Drug Target
ChemBioChem 4, 1041-1048 (2003)

394. Schubert, S.; Gül D.C.; Grunert, H.-P.; Zeichardt, H.; Erdmann, V.A.; Kurreck, J.:
RNA cleaving ´10-23´ DNAzymes with enhanced stability and activity
Nucleic Acids Res., Vol. 31, No. 20, 5982-5992 (2003)

395. Szymanski, M.; Erdmann, V.A.; Barciszewski, J.:
Riboregulators: An Overview; (Barciszewski, J. and Erdmann, V.A., editors)
Noncoding RNAs: Molecular Biology and Molecular Medicine
Landes Bioscience, Kluver Academic/Plenum Publishers, New York , N.Y. 1 – 10 (2003)

396. Grünweller, A.; Gillen, C.; Erdmann, V.A.; Kurreck, J.:
Cellular Uptake and Localization of a Cy3-Labeled siRNA Specific fort he Serine/Threonine Kinase Pim-1
Oligonucleotides 13, 345-352 (2003), (Mary Ann Liebert, Inc.)

397. Stuhlmüller, B.; Kunisch, E.; Franz, J.; Martinez-Gamboa, L.; Hernandez, M.M.; Pruss, A.; Ulbrich, N.; Erdmann, V.A.; Burmester, G.-R.; Kinne, R.W.:
Detection of Oncofetal H19 RNA in Rheumatoid Arthritis Synovial Tissue
Am. J. Pathol. Vol. 163, No. 3, 901-911 (2003)

398. Vallazza, M.; Erdmann, V.A.; Klussmann, S.; Perbandt, M.; Betzel, C.:
Revised Crystal Analysis of Novel RNA Molecules for Melecular Medicine
Ellettra Highlights, 20-24 (2002-2003)

399. Vallazza, M.; Perbandt, M.; Klussmann, S.; Rypniewski, W.; Einspahr, H.M.; Erdmann, V.A.; Betzel , Ch. :
First look at RNA in L-configuration
Acta Cryst. D60, 1-7 (2004)

400. Lamla, T.; Erdmann, V.A.:
The Nano-tag, a streptavidin-binding peptide fort he purification and detection of recombinant proteins
Prot. Expr. and Purification 33, 39-47 (2004)

401. Poller, W.; Fechner, H.; Kurreck, J.; Pauschinger, M.; Kühl, U.; Erdmann, V.A.; Lamers, J.M.J.; Schultheiss,H.-P.:
Nucleic acid-based modulation of cardiac gene expression fort he treatment of cardiac diseases
Z. Kardiol. 93, 171-193 (2004)

402. Schubert, S.; Fürste, J.P.; Werk, D.; Grunert, H.-P.; Zeichardt, H.; Erdmann, V.A.; Kurreck, J.:Gaining Target Access for Deoxyribozymes
J. Mol. Biol. 339, 355-363 (2004)

403. Schmidt, K.S.; Borkowski, S.; Bald, R.; Kurreck, J.; Stephens, A.W.; Hecht, M.; Friebe, M,: Dinkelborg, L.; Erdmann, V.A.:
Application of locked nucleic acids to improve aptamer in vivo stability and targeting function
Nucleic Acids Res., Vol. 32, No. 19, 5757-5765 (2004)

404. Warnecke, C.; Zaborowska, Z.; Kurreck, J.; Erdmann, V.A.; Frei, U.; Wiesener, M.; Eckardt, K.-W.:
Differentiating the functional role of hypoxia-inducible factor (HIF)-1α and HIF-2α (EPAS-1) by the use of RNA interference: erythropoietin is a HIF-2α target gene in Hep3B and Kelly cells
FASEB Journal express article 10.1096/fj.04-1640fje (published online July 1, 2004)

405. Zaborowska, Z.; Schubert, S.; Kurreck, J.; Erdmann, V.A.:
Deletion analysis in the catalytic region of the 10-23 DNA enzyme
FEBS-Lett.579, 554-558 (2005)

406. Schubert, S.; Grunert, H.-P.; Zeichardt, H.; Werk, D.; Erdmann, V.A.; Kurreck, J.:
Maintaining Inhibition: siRNA Double Expression Vectors Against Coxackieviral RNAs
J. Mol. Biol. 346, 457-465 (2005)

407. Schubert, S.; Grünweller, A.; Erdmann, V. A.; Kurreck, J.:
Local RNA Target Structure Influences siRNA Efficacy: Systematic Analysis of Intentionally Designed
Binding Regions
J. Mol. Biol. 348, 883-893 (2005)

408. Werk, D.; Schubert, S.; Lindig, V.; Grunert, H.-P.; Zeichardt, H.; Erdmann, V.A.; Kurreck, J.:
Developing an effective RNA interference strategy against a plus-strand RNA virus: silencing of coxsackievirus B3 and ist cognate coxsachievirus-adenovirus receptor
Biol. Chem. 386, 857-863 (2005)

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Letzte Änderung: 1.3.2006